Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NR5A2 ENSBTAG00000009265

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Description

nuclear receptor subfamily 5 group A member 2 [Source:VGNC Symbol;Acc:VGNC:32249]

Location

Primary_assembly 16: 78,828,931-78,957,232 forward strand.

ARS-UCD1.2:CM008183.2

About this gene

This gene has 5 transcripts (splice variants), 327 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
NR5A2-202	ENSBTAT00000069224.1	4597	541aa	ENSBTAP00000068907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5G9	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
NR5A2-205	ENSBTAT00000072306.1	2099	469aa	ENSBTAP00000064780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M3N7	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
NR5A2-203	ENSBTAT00000083594.1	2082	481aa	ENSBTAP00000064114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N3J8	-
NR5A2-201	ENSBTAT00000073402.1	1958	495aa	ENSBTAP00000072939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MFG0	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
NR5A2-204	ENSBTAT00000012207.5	1912	474aa	ENSBTAP00000012207.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MCM4	-

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Summary

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Gene-based displays