Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: JADE1 ENSBTAG00000017493

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Description

jade family PHD finger 1 [Source:VGNC Symbol;Acc:VGNC:30358]

Location

Primary_assembly 17: 28,946,726-29,148,288 reverse strand.

ARS-UCD1.2:CM008184.2

About this gene

This gene has 5 transcripts (splice variants), 288 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
JADE1-203	ENSBTAT00000079333.1	3187	843aa	ENSBTAP00000063921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MVP3	<p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
JADE1-204	ENSBTAT00000073531.1	3145	863aa	ENSBTAP00000061386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVG0	-
JADE1-201	ENSBTAT00000077189.1	2832	843aa	ENSBTAP00000065198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MVP3	<p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
JADE1-202	ENSBTAT00000032115.5	2697	843aa	ENSBTAP00000032057.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MVP3	<p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
JADE1-205	ENSBTAT00000080581.1	1515	504aa	ENSBTAP00000066344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N6Y8	-

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Summary

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Gene-based displays