Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pcsk1 ENSDARG00000002600

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Description

proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]

Location

Chromosome 21: 11,684,830-11,722,343 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 2 transcripts (splice variants), 293 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
pcsk1-202	ENSDART00000147473.3	2513	754aa	ENSDARP00000118568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIE6	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
pcsk1-201	ENSDART00000014668.5	2268	755aa	ENSDARP00000004083.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6VCA1	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,

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Summary

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Gene-based displays