Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cct6a ENSDARG00000021252

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Description

chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]

Gene Synonyms

fa95c01, wu:fa95c01

Location

Chromosome 21: 41,819,288-41,839,684 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 4 transcripts (splice variants), 295 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
cct6a-201	ENSDART00000009484.10	3922	531aa	ENSDARP00000016831.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZYX4	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
cct6a-202	ENSDART00000137630.3	2262	531aa	ENSDARP00000118006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGU4	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
cct6a-204	ENSDART00000160908.2	2258	531aa	ENSDARP00000136804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZYX4	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
cct6a-203	ENSDART00000141067.2	791	242aa	ENSDARP00000112608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QD64	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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Gene-based displays