Description
polypyrimidine tract binding protein 2 [Source:NCBI gene;Acc:424479]
Location
Chromosome 8: 13,336,528-13,398,389 reverse strand.
GRCg6a:CM000100.5
About this gene
This gene has 5 transcripts (splice variants), 379 orthologues and 4 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| PTBP2-202 | ENSGALT00000098756.1 | 3593 | 600aa | ENSGALP00000070538.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A3Q2U7S7 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| PTBP2-203 | ENSGALT00000095172.1 | 3427 | 675aa | ENSGALP00000073659.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A3Q2UNM8 | <p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5, |
| PTBP2-204 | ENSGALT00000097018.1 | 1707 | 568aa | ENSGALP00000072586.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A3Q3AWA9 | - |
| PTBP2-201 | ENSGALT00000052336.2 | 1692 | 563aa | ENSGALP00000046021.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1D5P047 | - |
| PTBP2-205 | ENSGALT00000008906.6 | 1527 | 484aa | ENSGALP00000008892.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1NRD6 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
