Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
- Paralogues
- Ensembl protein families
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Genetic Variation
- Variant table
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- Structural variants
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ID History
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Gene: CLASP2 ENSGALG00000032647

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Description

cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]

Location

Chromosome 2: 44,615,726-44,749,055 reverse strand.

GRCg6a:CM000094.5

About this gene

This gene has 5 transcripts (splice variants), 329 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
CLASP2-201	ENSGALT00000091569.1	4521	1506aa	ENSGALP00000068506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2U2T5	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
CLASP2-202	ENSGALT00000098887.1	4518	1505aa	ENSGALP00000073234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UGP2	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
CLASP2-203	ENSGALT00000067482.2	4512	1503aa	ENSGALP00000046443.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5P1B0	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
CLASP2-204	ENSGALT00000065195.2	4491	1496aa	ENSGALP00000053124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PJX5	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
CLASP2-205	ENSGALT00000094579.1	4386	1461aa	ENSGALP00000074179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2UJ67	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

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Summary

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Gene-based displays