Description
CBP80/20-dependent translation initiation factor [Source:NCBI gene;Acc:770140]
Location
Chromosome Z: 1,281,331-1,371,901 reverse strand.
GRCg6a:CM000122.5
About this gene
This gene has 5 transcripts (splice variants), 292 orthologues and 3 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| - | ENSGALT00000093745.1 | 2663 | 569aa | ENSGALP00000070999.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A3Q2U924 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSGALT00000093009.1 | 2455 | 565aa | ENSGALP00000073694.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A3Q2UNQ6 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSGALT00000097554.1 | 2087 | 635aa | ENSGALP00000071355.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A3Q2UAJ1 | <p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5, |
| - | ENSGALT00000050520.2 | 2079 | 607aa | ENSGALP00000057171.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1D5PW42 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSGALT00000068992.2 | 1965 | 569aa | ENSGALP00000046699.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1D5P205 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
