Description
paraoxonase 1 [Source:MGI Symbol;Acc:MGI:103295]
Gene Synonyms
Pon
Location
Chromosome 6: 5,168,090-5,193,946 reverse strand.
GRCm38:CM000999.2
About this gene
This gene has 4 transcripts (splice variants), 374 orthologues, 2 paralogues and is associated with 6 phenotypes.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| Pon1-201 | ENSMUST00000002663.11 | 1513 | 355aa | ENSMUSP00000002663.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS19898 | P52430 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Pon1-204 | ENSMUST00000177159.8 | 805 | 256aa | ENSMUSP00000135195.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | H3BK03 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, |
| Pon1-203 | ENSMUST00000176945.1 | 619 | 181aa | ENSMUSP00000135728.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | H3BLB8 | <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| Pon1-202 | ENSMUST00000176933.1 | 1544 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |
