Gene: Cacnb3 ENSMUSG00000003352

Description

calcium channel, voltage-dependent, beta 3 subunit [Source:MGI Symbol;Acc:MGI:103307]

Gene Synonyms

Beta3, Cchb3

Location

Chromosome 15: 98,630,840-98,644,529 forward strand.

GRCm38:CM001008.2

About this gene

This gene has 7 transcripts (splice variants), 389 orthologues, 3 paralogues and is associated with 20 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Cacnb3-202	ENSMUST00000109150.8	2513	483aa	ENSMUSP00000104778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37192	D3Z3Z3	<p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
Cacnb3-206	ENSMUST00000230490.1	2477	484aa	ENSMUSP00000155514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27800	P54285	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P3,
Cacnb3-201	ENSMUST00000003442.8	2734	457aa	ENSMUSP00000003442.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A0A2U3TZ49	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
Cacnb3-204	ENSMUST00000229282.1	376	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
Cacnb3-203	ENSMUST00000229223.1	346	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
Cacnb3-207	ENSMUST00000230769.1	346	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
Cacnb3-205	ENSMUST00000230064.1	2714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Gene: Cacnb3 ENSMUSG00000003352

Summary

Gene-based displays

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Gene: Cacnb3 ENSMUSG00000003352

Summary

Gene-based displays

About Us

Get help

Our sister sites

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