Gene: Faf1 ENSMUSG00000010517

Description

Fas-associated factor 1 [Source:MGI Symbol;Acc:MGI:109419]

Gene Synonyms

Dffrx, Fam

Location

Chromosome 4: 109,676,588-109,963,960 forward strand.

GRCm38:CM000997.2

About this gene

This gene has 3 transcripts (splice variants), 306 orthologues, 4 paralogues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Faf1-201	ENSMUST00000102724.4	4468	649aa	ENSMUSP00000099785.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18468	P54731	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Faf1-203	ENSMUST00000155204.1	1132	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	<p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2,
Faf1-202	ENSMUST00000143217.1	177	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	<p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5,

Gene: Faf1 ENSMUSG00000010517

Summary

Gene-based displays

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Gene: Faf1 ENSMUSG00000010517

Summary

Gene-based displays

About Us

Get help

Our sister sites

Follow us