Summary
- Splice variants
- Transcript comparison
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Gene: Gfap ENSMUSG00000020932

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Description

glial fibrillary acidic protein [Source:MGI Symbol;Acc:MGI:95697]

Location

Chromosome 11: 102,887,336-102,900,912 reverse strand.

GRCm38:CM001004.2

About this gene

This gene has 3 transcripts (splice variants), 289 orthologues, 68 paralogues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Gfap-201	ENSMUST00000067444.9	2648	430aa	ENSMUSP00000064691.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25507	P03995	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Gfap-202	ENSMUST00000077902.4	2600	428aa	ENSMUSP00000077061.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48950	P03995	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
Gfap-203	ENSMUST00000127909.1	356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	<p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3,

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Summary

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Gene-based displays