Summary
- Splice variants
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Gene: Yif1a ENSMUSG00000024875

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Description

Yip1 interacting factor homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915340]

Gene Synonyms

5330422J23Rik, 54TM, Yif1p

Location

Chromosome 19: 5,088,538-5,092,881 forward strand.

GRCm38:CM001012.2

About this gene

This gene has 6 transcripts (splice variants), 242 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Yif1a-201	ENSMUST00000025811.5	1488	293aa	ENSMUSP00000025811.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29450	Q91XB7	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Yif1a-203	ENSMUST00000236687.1	1178	284aa	ENSMUSP00000157857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A0A494B9Y3	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
Yif1a-206	ENSMUST00000238093.1	1018	240aa	ENSMUSP00000157938.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A0A494BA88	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
Yif1a-204	ENSMUST00000237025.1	941	241aa	ENSMUSP00000157411.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A0A494B8Y8	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
Yif1a-205	ENSMUST00000237603.1	1036	130aa	ENSMUSP00000157958.1	Nonsense mediated decay	-	A0A494BA71	-
Yif1a-202	ENSMUST00000235773.1	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

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Summary

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Gene-based displays