Description
RIKEN cDNA 2010300C02 gene [Source:MGI Symbol;Acc:MGI:1919347]
Location
Chromosome 1: 37,611,677-37,720,085 reverse strand.
GRCm38:CM000994.2
About this gene
This gene has 3 transcripts (splice variants), 183 orthologues, 1 paralogue and is associated with 9 phenotypes.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| 2010300C02Rik-203 | ENSMUST00000162875.7 | 4634 | 1175aa | ENSMUSP00000123803.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS48242 | E9Q3M9 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| 2010300C02Rik-201 | ENSMUST00000160023.5 | 2538 | 652aa | ENSMUSP00000125015.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | F7B0R9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |
| 2010300C02Rik-202 | ENSMUST00000160589.1 | 788 | 38aa | ENSMUSP00000124777.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | E0CXB3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |
