Description
olfactomedin 1 [Source:MGI Symbol;Acc:MGI:1860437]
Gene Synonyms
Noelin 1, Noelin 2, Pancortin 1-4
Location
Chromosome 2: 28,192,992-28,230,736 forward strand.
GRCm38:CM000995.2
About this gene
This gene has 5 transcripts (splice variants), 303 orthologues, 10 paralogues and is associated with 2 phenotypes.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| Olfm1-201 | ENSMUST00000028177.10 | 2757 | 485aa | ENSMUSP00000028177.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS15834 | Q8R357 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Olfm1-202 | ENSMUST00000100244.9 | 2686 | 457aa | ENSMUSP00000097815.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS15833 | G3X9Q7 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| Olfm1-203 | ENSMUST00000102879.3 | 1072 | 153aa | ENSMUSP00000099943.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS15835 | O88998 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| Olfm1-204 | ENSMUST00000113920.7 | 2513 | 442aa | ENSMUSP00000109553.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A3KGE4 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| Olfm1-205 | ENSMUST00000152415.1 | 1102 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |
