Summary
- Splice variants
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Gene: Rab13 ENSMUSG00000027935

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Description

RAB13, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1927232]

Gene Synonyms

0610007N03Rik, B230212B15Rik

Location

Chromosome 3: 90,213,695-90,226,385 forward strand.

GRCm38:CM000996.2

About this gene

This gene has 3 transcripts (splice variants), 224 orthologues and 62 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Rab13-202	ENSMUST00000107373.7	1415	121aa	ENSMUSP00000102996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS79962	D3YUS4	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,
Rab13-201	ENSMUST00000065418.6	1107	202aa	ENSMUSP00000070588.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17522	Q9DD03	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Rab13-203	ENSMUST00000198809.1	762	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	<p>TSL NA: A transcript that was not analysed for TSL.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:NA,

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Summary

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Gene-based displays