Description
coagulation factor III [Source:MGI Symbol;Acc:MGI:88381]
Gene Synonyms
CD142, Cf-3, Cf3, TF, tissue factor
Location
Chromosome 3: 121,723,537-121,735,048 forward strand.
GRCm38:CM000996.2
About this gene
This gene has 4 transcripts (splice variants), 378 orthologues, 12 paralogues and is associated with 48 phenotypes.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| F3-201 | ENSMUST00000029771.12 | 1872 | 294aa | ENSMUSP00000029771.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS17805 | A0A0R4J088 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| F3-204 | ENSMUST00000199997.1 | 1130 | 157aa | ENSMUSP00000143678.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A0G2JGS5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, |
| F3-202 | ENSMUST00000196746.1 | 700 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| F3-203 | ENSMUST00000197731.1 | 890 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, |
