Description
transmembrane protein 38B [Source:MGI Symbol;Acc:MGI:1098718]
Gene Synonyms
1600017F22Rik, D4Ertd89e, TRIC-B
Location
Chromosome 4: 53,826,045-53,862,019 forward strand.
GRCm38:CM000997.2
About this gene
This gene has 4 transcripts (splice variants), 294 orthologues, 1 paralogue and is associated with 22 phenotypes.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| Tmem38b-201 | ENSMUST00000030127.12 | 2862 | 292aa | ENSMUSP00000030127.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS18193 | Q9DAV9 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Tmem38b-202 | ENSMUST00000144167.1 | 608 | 163aa | ENSMUSP00000120304.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | X1WI17 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| Tmem38b-204 | ENSMUST00000151206.1 | 689 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| Tmem38b-203 | ENSMUST00000150803.1 | 586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
