Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: Tbx6 ENSMUSG00000030699

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Description

T-box 6 [Source:MGI Symbol;Acc:MGI:102539]

Location

Chromosome 7: 126,781,483-126,785,560 forward strand.

GRCm38:CM001000.2

About this gene

This gene has 2 transcripts (splice variants), 212 orthologues, 16 paralogues and is associated with 37 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Tbx6-201	ENSMUST00000094037.4	1727	436aa	ENSMUSP00000091579.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21843	P70327	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Tbx6-202	ENSMUST00000172352.7	1529	437aa	ENSMUSP00000126418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	P70327	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,

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Summary

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Gene-based displays