Description
TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
Gene Synonyms
4933431N12Rik, C76116
Location
Chromosome 8: 83,165,352-83,272,934 forward strand.
GRCm38:CM001001.2
About this gene
This gene has 3 transcripts (splice variants), 300 orthologues and 32 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| Tbc1d9-202 | ENSMUST00000093393.4 | 5334 | 1264aa | ENSMUSP00000091093.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS52607 | Q3UYK3 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Tbc1d9-201 | ENSMUST00000034145.10 | 4631 | 1031aa | ENSMUSP00000034145.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS22448 | Q3UYK3 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| Tbc1d9-203 | ENSMUST00000142673.1 | 744 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |
