Gene: Smpd3 ENSMUSG00000031906

Description

sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]

Gene Synonyms

4631433G07Rik, fro, nSMase2, neutral sphingomyelinase II

Location

Chromosome 8: 106,252,548-106,337,988 reverse strand.

GRCm38:CM001001.2

About this gene

This gene has 2 transcripts (splice variants), 293 orthologues, 1 paralogue and is associated with 70 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Smpd3-201	ENSMUST00000067512.7	5148	655aa	ENSMUSP00000069255.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22634	Q9JJY3	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Smpd3-202	ENSMUST00000212896.1	2626	655aa	ENSMUSP00000148282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS22634	Q9JJY3	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,

Gene: Smpd3 ENSMUSG00000031906

Summary

Gene-based displays

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Gene: Smpd3 ENSMUSG00000031906

Summary

Gene-based displays

About Us

Get help

Our sister sites

Follow us