Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
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ID History
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Gene: Lbx2 ENSMUSG00000034968

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Description

ladybird homeobox 2 [Source:MGI Symbol;Acc:MGI:1342288]

Gene Synonyms

Lbx2h

Location

Chromosome 6: 83,086,367-83,088,243 forward strand.

GRCm38:CM000999.2

About this gene

This gene has 2 transcripts (splice variants), 436 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Lbx2-201	ENSMUST00000041265.3	817	195aa	ENSMUSP00000047134.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20271	Q9WUN8	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Lbx2-202	ENSMUST00000151508.1	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	<p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3,

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Summary

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Gene-based displays