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- Splice variants
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Gene: B020004J07Rik ENSMUSG00000035201

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Description

RIKEN cDNA B020004J07 gene [Source:MGI Symbol;Acc:MGI:3588238]

Location

Chromosome 4: 101,834,969-101,844,023 reverse strand.

GRCm38:CM000997.2

About this gene

This gene has 2 transcripts (splice variants), 16 orthologues, 100 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
B020004J07Rik-202	ENSMUST00000106919.7	1976	476aa	ENSMUSP00000102532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51241	Q3UTC0	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
B020004J07Rik-201	ENSMUST00000084386.5	1695	476aa	ENSMUSP00000081421.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51241	Q3UTC0	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,

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Summary

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