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Gene: Snip1 ENSMUSG00000050213

Description

Smad nuclear interacting protein 1 [Source:MGI Symbol;Acc:MGI:2156003]

Gene Synonyms

2410133M08Rik

Location

Chromosome 4: 125,066,672-125,074,042 forward strand.

GRCm38:CM000997.2

About this gene

This gene has 2 transcripts (splice variants), 277 orthologues, 2 paralogues and is associated with 6 phenotypes.

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Snip1-201	ENSMUST00000052183.6	2345	383aa	ENSMUSP00000060721.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18636	Q8BIZ6	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Snip1-202	ENSMUST00000145733.1	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	<p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2,

Gene: Snip1 ENSMUSG00000050213

Summary

Gene-based displays

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Gene: Snip1 ENSMUSG00000050213

Summary

Gene-based displays

About Us

Get help

Our sister sites

Follow us