Gene: Taf4b ENSMUSG00000054321

Description

TATA-box binding protein associated factor 4b [Source:MGI Symbol;Acc:MGI:2152345]

Gene Synonyms

105kDa, 2610524B04Rik, 4932409F03Rik, TAFII105, Taf2c2

Location

Chromosome 18: 14,783,245-14,900,359 forward strand.

GRCm38:CM001011.2

About this gene

This gene has 2 transcripts (splice variants), 260 orthologues, 1 paralogue and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Taf4b-201	ENSMUST00000169862.1	5149	855aa	ENSMUSP00000126909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50227	A0A3B2W725	<p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P2,
Taf4b-202	ENSMUST00000234789.1	5134	850aa	ENSMUSP00000157354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A0A3Q4EGS4	The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

Gene: Taf4b ENSMUSG00000054321

Summary

Gene-based displays

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Gene: Taf4b ENSMUSG00000054321

Summary

Gene-based displays

About Us

Get help

Our sister sites

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