Description
F-box protein 6 [Source:MGI Symbol;Acc:MGI:1354743]
Gene Synonyms
FBG2, Fbs2, Fbx6b, Fbxo6b
Location
Chromosome 4: 148,145,716-148,152,140 reverse strand.
GRCm38:CM000997.2
About this gene
This gene has 8 transcripts (splice variants), 116 orthologues and 5 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| Fbxo6-203 | ENSMUST00000105706.7 | 1938 | 295aa | ENSMUSP00000101331.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS18933 | Q9QZN4 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Fbxo6-201 | ENSMUST00000030858.13 | 1346 | 295aa | ENSMUSP00000030858.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS18933 | Q9QZN4 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Fbxo6-208 | ENSMUST00000168503.7 | 1240 | 295aa | ENSMUSP00000130188.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS18933 | Q9QZN4 | <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Fbxo6-202 | ENSMUST00000056965.11 | 1163 | 295aa | ENSMUSP00000062348.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS18933 | Q9QZN4 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Fbxo6-207 | ENSMUST00000152098.7 | 952 | 265aa | ENSMUSP00000121379.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | Z4YN00 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, |
| Fbxo6-206 | ENSMUST00000134261.1 | 811 | 228aa | ENSMUSP00000123132.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A2A7G9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, |
| Fbxo6-204 | ENSMUST00000126615.7 | 794 | 237aa | ENSMUSP00000120801.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A2A7H1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, |
| Fbxo6-205 | ENSMUST00000132083.1 | 339 | 64aa | ENSMUSP00000120431.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A2A7H3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
