Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
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Genetic Variation
- Variant table
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- Structural variants
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ID History
- Gene history

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Gene: PXDN ENSPTRG00000011612

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Description

peroxidasin [Source:VGNC Symbol;Acc:VGNC:10745]

Location

Chromosome 2A: 1,589,738-1,699,128 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 2 transcripts (splice variants), 311 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
PXDN-202	ENSPTRT00000089438.1	6844	1479aa	ENSPTRP00000090912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X4I0 K7D7S6	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
PXDN-201	ENSPTRT00000021645.5	6769	1455aa	ENSPTRP00000019970.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QHD2	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

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Summary

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Gene-based displays