Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
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Genetic Variation
- Variant table
- Variant image
- Structural variants
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATPSCKMT ENSPTRG00000016724

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Description

ATP synthase c subunit lysine N-methyltransferase [Source:VGNC Symbol;Acc:VGNC:3991]

Gene Synonyms

FAM173B

Location

Chromosome 5: 10,491,180-10,515,583 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 3 transcripts (splice variants), 277 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ATPSCKMT-201	ENSPTRT00000090716.1	2610	216aa	ENSPTRP00000074222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SCJ8 A0A6D2Y881	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
ATPSCKMT-202	ENSPTRT00000031065.4	2468	233aa	ENSPTRP00000028694.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6R8V3 G2HJW7	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
ATPSCKMT-203	ENSPTRT00000095492.1	699	232aa	ENSPTRP00000066381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNU9	-

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Summary

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Gene-based displays