Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FNDC1 ENSPTRG00000018754

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Description

fibronectin type III domain containing 1 [Source:VGNC Symbol;Acc:VGNC:10350]

Location

Chromosome 6: 163,469,320-163,571,808 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants), 285 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FNDC1-201	ENSPTRT00000034628.4	6822	1888aa	ENSPTRP00000032009.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QTZ4	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
FNDC1-202	ENSPTRT00000081244.1	6559	1865aa	ENSPTRP00000063743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RH92	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
FNDC1-203	ENSPTRT00000089974.1	5664	1887aa	ENSPTRP00000066377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNZ0	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

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Summary

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Gene-based displays