Summary
- Splice variants
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Comparative Genomics
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Gene: Chd9 ENSRNOG00000049302

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Description

chromodomain helicase DNA binding protein 9 [Source:RGD Symbol;Acc:1306795]

Gene Synonyms

CReMM, LOC307726

Location

Chromosome 19: 17,366,828-17,494,585 reverse strand.

Rnor_6.0:CM000090.5

About this gene

This gene has 7 transcripts (splice variants), 314 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Chd9-207	ENSRNOT00000078786.1	7788	2596aa	ENSRNOP00000070362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXQ2	<p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Chd9-204	ENSRNOT00000076138.1	4783	1571aa	ENSRNOP00000067932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJJ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
Chd9-203	ENSRNOT00000075991.2	4159	1156aa	ENSRNOP00000068278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJV7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
Chd9-201	ENSRNOT00000075914.1	104	35aa	ENSRNOP00000068032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKG1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
Chd9-205	ENSRNOT00000076814.2	4783	1571aa	ENSRNOP00000068157.1	Nonsense mediated decay	A0A096MJJ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
Chd9-202	ENSRNOT00000075970.2	3948	125aa	ENSRNOP00000068108.1	Nonsense mediated decay	A0A096MJF3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
Chd9-206	ENSRNOT00000076830.2	104	35aa	ENSRNOP00000068501.1	Nonsense mediated decay	A0A096MKG1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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Gene-based displays