Description
MIA SH3 domain ER export factor 2 [Source:NCBI gene (formerly Entrezgene);Acc:100155295]
Location
Chromosome 1: 169,777,595-169,870,892 forward strand.
Sscrofa11.1:CM000812.5
About this gene
This gene has 7 transcripts (splice variants), 258 orthologues and 6 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| - | ENSSSCT00000005502.4 | 5379 | 788aa | ENSSSCP00000005365.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1SIP9 | - |
| - | ENSSSCT00000005496.4 | 4870 | 1401aa | ENSSSCP00000005359.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1SU41 F1SIR4 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000065451.2 | 4867 | 1400aa | ENSSSCP00000048731.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AXQ5 A0A4X1SSM4 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000065104.2 | 4824 | 1410aa | ENSSSCP00000039435.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A6D5 A0A4X1SUF4 | <p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5, |
| - | ENSSSCT00000051414.1 | 4441 | 1358aa | ENSSSCP00000034005.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZQW1 A0A4X1SU61 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000083148.1 | 4426 | 1353aa | ENSSSCP00000062835.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1SU76 A0A5G2QF61 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000030475.3 | 3233 | 751aa | ENSSSCP00000027225.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3LSY2 | - |
