Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: SULF1 ENSSSCG00000006197

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Description

sulfatase 1 [Source:VGNC Symbol;Acc:VGNC:93612]

Location

Chromosome 4: 65,595,949-65,778,884 reverse strand.

Sscrofa11.1:CM000815.5

About this gene

This gene has 3 transcripts (splice variants), 312 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
SULF1-201	ENSSSCT00000037262.2	5472	870aa	ENSSSCP00000052379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ACQ9 A0A4X1UUU5	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
SULF1-203	ENSSSCT00000059775.2	5383	892aa	ENSSSCP00000045104.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480RLM4 A0A4X1UW19	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
SULF1-202	ENSSSCT00000006792.4	5341	1108aa	ENSSSCP00000006608.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RU06	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,

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Summary

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Gene-based displays