Description
intraflagellar transport 52 [Source:VGNC Symbol;Acc:VGNC:95699]
Location
Chromosome 17: 46,202,359-46,247,298 forward strand.
Sscrofa11.1:CM000828.5
About this gene
This gene has 5 transcripts (splice variants) and 296 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| IFT52-201 | ENSSSCT00000047140.2 | 8522 | 446aa | ENSSSCP00000049117.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AZ15 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| IFT52-202 | ENSSSCT00000008060.4 | 2229 | 446aa | ENSSSCP00000007845.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1TU87 F1SDT5 | <p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5, |
| IFT52-203 | ENSSSCT00000023856.3 | 2160 | 423aa | ENSSSCP00000025477.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | I3LN05 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| IFT52-204 | ENSSSCT00000056212.2 | 2157 | 422aa | ENSSSCP00000033392.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZPK6 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| IFT52-205 | ENSSSCT00000089713.1 | 1065 | 287aa | ENSSSCP00000070905.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R163 | - |
