Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSSSCG00000012999

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Description

calpain 1 [Source:VGNC Symbol;Acc:VGNC:86170]

Location

Chromosome 2: 6,997,516-7,081,432 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 310 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
CAPN1-202	ENSSSCT00000067293.1	4097	714aa	ENSSSCP00000067028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P35750	<p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
CAPN1-203	ENSSSCT00000088656.1	3997	601aa	ENSSSCP00000063219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QYC6	-
CAPN1-204	ENSSSCT00000059315.2	3526	650aa	ENSSSCP00000033221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6H4P7	-
CAPN1-201	ENSSSCT00000014210.4	2787	775aa	ENSSSCP00000013824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6GBZ7	-

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Summary

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Gene-based displays