Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: FXR2 ENSSSCG00000017953

.

Description

FMR1 autosomal homolog 2 [Source:NCBI gene (formerly Entrezgene);Acc:100512131]

Location

Chromosome 12: 52,882,870-52,903,477 reverse strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants), 242 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FXR2-201	ENSSSCT00000038801.2	4226	620aa	ENSSSCP00000054501.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BD79	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
FXR2-202	ENSSSCT00000061375.2	3295	599aa	ENSSSCP00000059507.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BTE5	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
FXR2-203	ENSSSCT00000019537.5	2987	667aa	ENSSSCP00000019019.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1ST39	-

.

Summary

.

.

Gene-based displays