Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
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Gene: TNNT2 ENSSSCG00000023031

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Description

Sus scrofa troponin T2, cardiac type (TNNT2), transcript variant 4, mRNA. [Source:RefSeq mRNA;Acc:NM_001353845]

Location

Chromosome 10: 23,749,335-23,763,396 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 5 transcripts (splice variants), 364 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
TNNT2-201	ENSSSCT00000026600.3	1148	295aa	ENSSSCP00000026957.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LS66	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
TNNT2-204	ENSSSCT00000082364.1	1140	292aa	ENSSSCP00000063944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QHS9	-
TNNT2-203	ENSSSCT00000075174.1	1118	285aa	ENSSSCP00000060246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q8N0	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
TNNT2-202	ENSSSCT00000039113.2	1100	279aa	ENSSSCP00000033879.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQY4	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
TNNT2-205	ENSSSCT00000086032.1	1025	254aa	ENSSSCP00000074555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SJV8 A0A5G2RB45	-

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Summary

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Gene-based displays