Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MT1A ENSSSCG00000023684

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Description

metallothionein-1E-like [Source:NCBI gene (formerly Entrezgene);Acc:102166944]

Gene Synonyms

MT-IA

Location

Chromosome 6: 18,660,642-18,673,766 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 6 transcripts (splice variants), 100 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MT1A-201	ENSSSCT00000029094.3	598	113aa	ENSSSCP00000025883.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SEJ3 A0A5S8L8D1	-
MT1A-202	ENSSSCT00000031974.3	488	61aa	ENSSSCP00000025546.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49068	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
MT1A-203	ENSSSCT00000036829.2	472	61aa	ENSSSCP00000051123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49068	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
MT1A-204	ENSSSCT00000066331.2	396	61aa	ENSSSCP00000041696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ACJ9	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
MT1A-205	ENSSSCT00000077842.1	282	47aa	ENSSSCP00000067816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0S6	-
MT1A-206	ENSSSCT00000079322.1	204	44aa	ENSSSCP00000063061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFQ8	-

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Summary

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Gene-based displays