Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
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  - Gene tree
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Ontologies
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External references
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ID History
- Gene history

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Gene: NLGN3 ENSSSCG00000027465

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Description

neuroligin 3 [Source:VGNC Symbol;Acc:VGNC:90778]

Location

Chromosome X: 57,176,103-57,201,486 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 2 transcripts (splice variants), 333 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
NLGN3-202	ENSSSCT00000052429.2	4920	848aa	ENSSSCP00000040532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A9R2	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
NLGN3-201	ENSSSCT00000013553.4	4847	828aa	ENSSSCP00000013190.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RSW0	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,

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Summary

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Gene-based displays