Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Orthologues
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Ontologies
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ID History
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Gene: FOXN2 ENSSSCG00000029593

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Description

forkhead box N2 [Source:VGNC Symbol;Acc:VGNC:88219]

Location

Chromosome 3: 92,268,782-92,336,865 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 2 transcripts (splice variants), 320 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FOXN2-201	ENSSSCT00000057213.2	5479	439aa	ENSSSCP00000039823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SF11 I3LTD2	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
FOXN2-202	ENSSSCT00000064038.2	1879	416aa	ENSSSCP00000047833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AV81 A0A4X1SEX2	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

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Summary

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Gene-based displays