Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
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External references
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ID History
- Gene history

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Gene: SLC25A39 ENSSSCG00000030167

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Description

solute carrier family 25 member 39 [Source:VGNC Symbol;Acc:VGNC:93014]

Location

Chromosome 12: 18,914,434-18,919,759 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
SLC25A39-202	ENSSSCT00000030896.3	1576	359aa	ENSSSCP00000024819.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TLW0 I3LL52	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
SLC25A39-203	ENSSSCT00000061128.2	1330	336aa	ENSSSCP00000031971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZK84 A0A4X1TJG1	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
SLC25A39-201	ENSSSCT00000040734.2	1114	317aa	ENSSSCP00000058762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BRG0	-

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Summary

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Gene-based displays