Description
guanylate-binding protein 6-like [Source:NCBI gene (formerly Entrezgene);Acc:102161784]
Location
Chromosome 4: 127,177,202-127,376,861 forward strand.
Sscrofa11.1:CM000815.5
About this gene
This gene has 10 transcripts (splice variants), 370 orthologues and 6 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| - | ENSSSCT00000075168.1 | 9039 | 893aa | ENSSSCP00000069735.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R020 | <p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5, |
| - | ENSSSCT00000035464.3 | 8015 | 758aa | ENSSSCP00000028240.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7GK68 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000057852.2 | 8015 | 758aa | ENSSSCP00000047356.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ATU7 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000063414.2 | 8015 | 758aa | ENSSSCP00000031690.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZJQ6 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000076890.1 | 8015 | 758aa | ENSSSCP00000059794.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QCN2 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000007579.5 | 4126 | 865aa | ENSSSCP00000007378.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1S4E0 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000051061.2 | 3438 | 725aa | ENSSSCP00000038126.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287A2G1 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000034721.3 | 3327 | 730aa | ENSSSCP00000051586.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B571 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000053032.2 | 3327 | 730aa | ENSSSCP00000035474.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZVF6 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000083408.1 | 3327 | 730aa | ENSSSCP00000072245.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RJW0 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
