Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NIPSNAP2 ENSSSCG00000036659

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Description

nipsnap homolog 2 [Source:NCBI gene (formerly Entrezgene);Acc:100520953]

Location

Chromosome 3: 16,882,643-16,941,739 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 7 transcripts (splice variants), 368 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
NIPSNAP2-204	ENSSSCT00000041780.2	1959	286aa	ENSSSCP00000041267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ABB8 A0A4X1T1J5	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
NIPSNAP2-205	ENSSSCT00000040553.2	1851	247aa	ENSSSCP00000054462.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BEE0 A0A4X1T2F0	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
NIPSNAP2-202	ENSSSCT00000050764.2	1051	322aa	ENSSSCP00000034936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTN4 A0A4X1T0G0	-
NIPSNAP2-207	ENSSSCT00000088006.1	925	280aa	ENSSSCP00000068500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWH5	-
NIPSNAP2-203	ENSSSCT00000062692.2	919	278aa	ENSSSCP00000041612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ACQ7	-
NIPSNAP2-206	ENSSSCT00000070847.1	901	272aa	ENSSSCP00000060302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QPT6	-
NIPSNAP2-201	ENSSSCT00000061697.2	889	268aa	ENSSSCP00000045766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APA1	-

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Summary

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Gene-based displays