Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A6 ENSSSCG00000037430

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Description

collagen type VI alpha 6 chain [Source:NCBI gene (formerly Entrezgene);Acc:100516642]

Location

Chromosome 13: 1,817,404-1,985,803 reverse strand.

Sscrofa11.1:CM000824.5

About this gene

This gene has 2 transcripts (splice variants), 360 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
COL6A6-201	ENSSSCT00000070934.1	8768	2266aa	ENSSSCP00000070825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0Y2	<p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
COL6A6-202	ENSSSCT00000053187.2	8102	2044aa	ENSSSCP00000037369.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287A0A6	-

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Summary

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Gene-based displays