Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HOXD8 ENSSSCG00000040349

.

Description

homeobox D8 [Source:VGNC Symbol;Acc:VGNC:96356]

Location

Chromosome 15: 81,931,383-81,935,529 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 3 transcripts (splice variants), 178 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
HOXD8-202	ENSSSCT00000060973.2	3522	291aa	ENSSSCP00000055275.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BGU6	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
HOXD8-203	ENSSSCT00000076749.1	3207	186aa	ENSSSCP00000069275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R520	-
HOXD8-201	ENSSSCT00000090436.1	1803	106aa	ENSSSCP00000062993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QGQ7	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

.

Summary

.

.

Gene-based displays